I developed a preprocessing package to complement the VAMPIRE package, which was created by Owen Lin, a former undergraduate researcher at the Nance Lab. My package is designed to help researchers who are not proficient in coding to easily apply morphology analysis pipelines to their data. The goal was to make the tool accessible to a broader audience and streamline the process for researchers in the lab.
You can find the related packages here:
Project 1: Analyzing Effects of Cerebral Ischemia Project 2: Quantitative Microglia Branching Analysis Project 3: VAMPIRE Preprocessing Package